Experimantal Kd data | Enrichment Ratio (ER) | |
---|---|---|
Fab1 (Heavy chain) | Fab2 (Light chain) | Fab1 (Heavy chain) |
VH:Y32R, VH:G33D, VH:V50L, VH:V50Q, VH:I51G, VH:T57G, VH:T57P, VH:T100D, VH:Y101W, VH:F106Y | VL:T97D, VL:T97S, VL:G30Y, VL:Q27Y, VL:A25V |
VH:N31A, VH:N31C, VH:N31D, VH:N31E, VH:N31F, VH:N31G, VH:N31H, VH:N31L, VH:N31M, VH:Y32A, VH:Y32C, VH:Y32D, VH:Y32F, VH:Y32G, VH:Y32I, VH:Y32K, VH:Y32L, VH:V50A, VH:V50C, VH:V50E, VH:V50F, VH:V50G, VH:V50I, VH:V50K, VH:V50L, VH:V50M, VH:V50N, VH:V50P, VH:V50Q, VH:V50R, VH:V50S, VH:V50T, VH:I51A, VH:I51C, VH:I51D, VH:I51F, VH:I51G, VH:I51H, VH:W52A, VH:W52C, VH:W52D, VH:W52E, VH:W52F, VH:W52G, VH:W52H, VH:W52I, VH:W52K, VH:W52L, VH:W52M, VH:W52P, VH:W52Q, VH:W52R, VH:W52S, VH:W52T, VH:W52V, VH:T57G, VH:T57H, VH:T57I, VH:T57L, VH:T57M, VH:T57N, VH:T57P, VH:T57Q, VH:T57R, VH:T57S, VH:D58A, VH:Y59C, VH:Y59D, VH:V50L, VH:V50Q, VH:I51G, VH:W52G, VH:W52T, VH:T57G, VH:T57P, VH:T57S, VH:Y59C |
Group | Fab's Mutation | Kd(nM) Experiment | lg[Kd] Calculat. | ΔΔG | TΔS |
---|---|---|---|---|---|
EGFR-mutFab1-Fab2 | Y32R | 6.800000 | 13.511289 | -2.58E-08 | 0.000641 |
EGFR-mutFab1-Fab2 | G33D | 1.900000 | 13.511047 | 3.66E-08 | -0.000738 |
EGFR-mutFab1-Fab2 | V50L | 3.100000 | 13.511175 | 2.15E-10 | -0.000007 |
EGFR-mutFab1-Fab2 | V50Q | 2.900000 | 13.511182 | 3.40E-09 | 0.000030 |
EGFR-mutFab1-Fab2 | I51G | 3.600000 | 13.511205 | -1.62E-09 | 0.000162 |
EGFR-mutFab1-Fab2 | T57G | 3.900000 | 13.511229 | 9.75E-10 | 0.000300 |
EGFR-mutFab1-Fab2 | T57P | 3.800000 | 13.511126 | -1.62E-10 | -0.000287 |
EGFR-mutFab1-Fab2 | T100D | 1.600000 | 13.511116 | 1.55E-09 | -0.000345 |
EGFR-mutFab1-Fab2 | Y101W | 5.800000 | 13.511206 | -2.11E-08 | 0.000168 |
EGFR-mutFab1-Fab2 | F106TYR | 4.000000 | -- | -- | -- |
EGFR-Fab1-mutFab2 | T97CYS | 3.6 | 13.51143035 | 1.05E-08 | 0.0014442 |
EGFR-Fab1-mutFab2 | T97D | 2.8 | 13.51117644 | -7.41E-10 | -0.000179 |
EGFR-Fab1-mutFab2 | T97S | 2.6 | 13.51115395 | -3.08E-10 | -0.000128 |
EGFR-Fab1-mutFab2 | G30TYR | 1.8 | 13.51113315 | -1.23E-09 | -0.000246 |
EGFR-Fab1-mutFab2 | Q27TYR | 2.1 | 13.51115383 | -4.34E-10 | -0.000129 |
EGFR-Fab1-mutFab2 | A25V | 3.0 | 13.51110474 | 3.28E-09 | -0.000408 |
Mutation Pair | Affinity Change | log(cond(W)) |
---|---|---|
VH:W52D, VL:WT | 0.04 | 5.311281 |
VH:W52H, VL:WT | 0.06 | 5.311280 |
VH:I51F, VL:WT | 0.15 | 5.311323 |
VH:W52M, VL:WT | 0.23 | 5.311267 |
VH:T57M, VL:WT | 0.65 | 5.311206 |
VH:T57N, VL:WT | 1.41 | 5.311211 |
VH:T57H, VL:WT | 2.74 | 5.311225 |
VH:T57S, VL:WT | 5.23 | 5.311197 |
VH:T57P, VL:WT | 6.30 | 5.311204 |
VH:T57P, VL:WT | 7.65 | 5.311204 |
Mutations | ER value Experiment | ER unit | lg(cond(W)) Calculated | lg[Kd]Calculated | ΔS Calculated |
---|---|---|---|---|---|
VH:N31A, VL:WT | 0.55 | unitless | 5.30465489678283 | 10.0658563982087 | 10.6884556723072 |
VH:N31C, VL:WT | 0.11 | unitless | 5.30442207977766 | 10.7973656236084 | 19.0040367707908 |
VH:N31D, VL:WT | 4.59 | unitless | 5.31188933096192 | 8.65617641931785 | -5.33636646176843 |
VH:N31E, VL:WT | 0.14 | unitless | 5.31170210190819 | 9.0381746433799 | -9.93923367649596 |
VH:N31F, VL:WT | 0.47 | unitless | 5.3066766753011 | 9.49042437011593 | 4.14711521783524 |
VH:N31G, VL:WT | 0.13 | unitless | 5.30551673805124 | 9.68197393060808 | 6.32459346040042 |
VH:N31H, VL:WT | 0.87 | unitless | 5.31183727104048 | 8.91781599394633 | -2.36212493482854 |
VH:N31L, VL:WT | 0.24 | unitless | 5.30676771639821 | 11.5291283549269 | 4.02929900054731 |
VH:N31M, VL:WT | 0.59 | unitless | 5.31071532255824 | 9.17829320396885 | 0.598902539736517 |
VH:Y32A, VL:WT | 0.06 | unitless | 5.30939896159341 | 9.81909103670964 | 7.88330262428721 |
VH:Y32C, VL:WT | 0.05 | unitless | 5.30936087535049 | 10.5263573240586 | 15.9232972668682 |
VH:Y32D, VL:WT | 0.1 | unitless | 5.31257739462971 | 8.43739323112317 | -7.82342884490631 |
VH:Y32F, VL:WT | 0.08 | unitless | 5.31046358008294 | 9.26372446650866 | 1.57005979924854 |
VH:Y32G, VL:WT | 0.03 | unitless | 5.30986373918694 | 9.44875550357587 | 3.67343772837489 |
VH:Y32I, VL:WT | 0.14 | unitless | 5.31008544074025 | 9.36568301240269 | 2.72909426878821 |
VH:Y32K, VL:WT | 0.03 | unitless | 5.30967967472341 | 9.76686040552305 | 7.2895603726539004 |
VH:Y32L, VL:WT | 0.08 | unitless | 5.31050840232109 | 9.25369298404079 | 1.45602489026877 |
VH:V50A, VL:WT | 0.17 | unitless | 5.31048931728494 | 9.68790158072128 | 6.39198020914719 |
VH:V50C, VL:WT | 0.38 | unitless | 5.31044029286534 | 10.3967219798981 | 14.4496415304239 |
VH:V50E, VL:WT | 7.11 | unitless | 5.31203358722249 | 8.68708047902286 | -4.98505813563285 |
VH:V50F, VL:WT | 0.04 | unitless | 5.31119672957361 | 9.13166911060683 | 0.068893875884354 |
VH:V50G, VL:WT | 0.05 | unitless | 5.31082720927245 | 9.31693696969268 | 2.1749640652004 |
VH:V50I, VL:WT | 10.09 | unitless | 5.31097072519356 | 9.23374933229885 | 1.22931161065827 |
VH:V50K, VL:WT | 0.83 | unitless | 5.31066649920348 | 9.63630720214493 | 5.80547062776929 |
VH:V50L, VL:WT | 8.07 | unitless | 5.31122208259665 | 9.12162708500717 | -0.0452608958953277 |
VH:V50M, VL:WT | 2.8 | unitless | 5.31196145694277 | 8.82657514192204 | -3.39932397098418 |
VH:V50N, VL:WT | 3.77 | unitless | 5.31201369991092 | 8.7742789471631 | -3.99381166611559 |
VH:V50P, VL:WT | 0.02 | unitless | 5.3119399986352 | 8.84192918900601 | -3.22478370252831 |
VH:V50Q, VL:WT | 12.73 | unitless | 5.31137231613444 | 9.15800770524636 | 0.368303359674853 |
VH:V50R, VL:WT | 0.04 | unitless | 5.31089334476205 | 9.42949465373925 | 3.45448667670609 |
VH:V50S, VL:WT | 0.02 | unitless | 5.31169581275435 | 8.95333444080075 | -1.95836178493373 |
VH:V50T, VL:WT | 0.03 | unitless | 5.31120136135828 | 9.12981830573242 | 0.0478544744017033 |
VH:I51A, VL:WT | 6.83 | unitless | 5.31093932115807 | 9.56816054308819 | 5.03079965789813 |
VH:I51C, VL:WT | 7.96 | unitless | 5.31092731501162 | 10.2585579985209 | 12.8790344074327 |
VH:I51D, VL:WT | 3.66 | unitless | 5.31171904173924 | 0.00804452669750908 | -10.4727364041978 |
VH:I51F, VL:WT | 0.15 | unitless | 5.31132335383009 | 9.02588419510022 | -1.13363778505738 |
VH:I51G, VL:WT | 7.28 | unitless | 5.31113578605421 | 9.20676059621936 | 0.92251171258254 |
VH:I51H, VL:WT | 1.17 | unitless | 5.31171287267527 | 8.46602096430725 | -7.49799772439746 |
VH:W52A, VL:WT | 0.03 | unitless | 5.31142797525432 | 9.74899572846912 | 7.08648102805475 |
VH:W52C, VL:WT | 0.09 | unitless | 5.31184423077815 | 10.535958240342 | 16.0324391272039 |
VH:W52D, VL:WT | 0.04 | unitless | 5.31128077649815 | 8.28634407597585 | -9.5405118814257 |
VH:W52E, VL:WT | 0.04 | unitless | 5.31128026385063 | 8.66886755971091 | -5.19209767964454 |
VH:W52F, VL:WT | 0.39 | unitless | 5.31121239743305 | 9.13387733087787 | 0.0939962822701854 |
VH:W52G, VL:WT | 7.68 | unitless | 5.31125469333299 | 9.33763982617885 | 2.41030828841955 |
VH:W52H, VL:WT | 0.06 | unitless | 5.31128023519849 | 8.54786427327254 | -6.56762737030931 |
VH:W52I, VL:WT | 4.7 | unitless | 5.31122924320887 | 9.24587905922437 | 1.36719892401219 |
VH:W52K, VL:WT | 0.03 | unitless | 5.31149855093895 | 9.6787716523196 | 6.28819447298958 |
VH:W52L, VL:WT | 0.28 | unitless | 5.31121185207414 | 9.12291002632816 | -0.0306768032108833 |
VH:W52M, VL:WT | 0.23 | unitless | 5.31126716827709 | 8.80934518450926 | -3.59518945896586 |
VH:W52P, VL:WT | 0.02 | unitless | 5.31126446306588 | 8.82510160395692 | -3.41607512899627 |
VH:W52Q, VL:WT | 0.21 | unitless | 5.31130931853346 | 9.15802919961531 | 0.368547663991 |
VH:W52R, VL:WT | 0.16 | unitless | 5.31140188692081 | 9.45239279770873 | 3.71478632890049 |
VH:W52S, VL:WT | 0.06 | unitless | 5.31123587853955 | 8.9414482608198 | -2.09348064761582 |
VH:W52T, VL:WT | 6.54 | unitless | 5.31121228015027 | 9.13185516690879 | 0.0710089182975722 |
VH:W52V, VL:WT | 0.7 | unitless | 5.31121204151 | 9.12725709795977 | 0.0187394257713237 |
VH:T57G, VL:WT | 6.84 | unitless | 5.31125789103379 | 9.31516580724754 | 2.15483026803873 |
VH:T57H, VL:WT | 2.74 | unitless | 5.31122518445683 | 8.55958533857492 | -6.43438578774125 |
VH:T57I, VL:WT | 0.23 | unitless | 5.31123473263104 | 9.23087220863167 | 1.19660547347694 |
VH:T57L, VL:WT | 0.13 | unitless | 5.31121053747604 | 9.11731627091173 | -0.0942649666260759 |
VH:T57M, VL:WT | 0.65 | unitless | 5.31120591423376 | 8.81963438646642 | -3.47822488049714 |
VH:T57N, VL:WT | 1.41 | unitless | 5.31121132536026 | 8.76717302623067 | -4.07459015578779 |
VH:T57P, VL:WT | 7.65 | unitless | 5.3112043408725 | 8.83505385032192 | -3.30294096170009 |
VH:T57Q, VL:WT | 1.13 | unitless | 5.31135534781724 | 9.15261134028488 | 0.306959063488441 |
VH:T57R, VL:WT | 0.12 | unitless | 5.31148018247654 | 9.42663082562225 | 3.42193187077471 |
VH:T57S, VL:WT | 5.23 | unitless | 5.31119690101269 | 8.94720197360279 | -2.02807415989505 |
VH:D58A, VL:WT | 0.07 | unitless | 5.30954802755892 | 10.5279540547397 | 15.941448541957 |
VH:Y59C, VL:WT | 5.62 | unitless | 5.30966973705319 | 10.4123699335681 | 14.6275223970058 |
VH:Y59D, VL:WT | 4.17 | unitless | 5.31167102687009 | 8.44429427330501 | -7.74498036785361 |
VH:V50L, VL:WT | 7.5 | unitless | 5.31122208259665 | 9.12162708500717 | -0.0452608958953277 |
VH:V50Q, VL:WT | 7.0 | unitless | 5.31137231613444 | 9.15800770524636 | 0.368303359674853 |
VH:I51G, VL:WT | 6.4 | unitless | 5.31113578605421 | 9.20676059621936 | 0.92251171258254 |
VH:W52G, VL:WT | 5.0 | unitless | 5.31125469333299 | 9.33763982617885 | 2.41030828841955 |
VH:W52T, VL:WT | 4.0 | unitless | 5.31121228015027 | 9.13185516690879 | 0.0710089182975722 |
VH:T57G, VL:WT | 4.8 | unitless | 5.31125789103379 | 9.31516580724754 | 2.15483026803873 |
VH:T57P, VL:WT | 6.3 | unitless | 5.3112043408725 | 8.83505385032192 | -3.30294096170009 |
VH:T57S, VL:WT | 2.1 | unitless | 5.31119690101269 | 8.94720197360279 | -2.02807415989505 |
VH:Y59C, VL:WT | 2.2 | unitless | 5.30966973705319 | 10.4123699335681 | 14.6275223970058 |