Examples of calculated data obtained for Alanine

Biochemical software
chemical structure, chemical structure of water, chemical bonding and molecular structure class, chemical formula of water
Three-dimensional structure of Alanine molecule
Gausian
Dipole moment (field-independent basis, Debye):
X= -13.2600 Y= -2.1934 Z= -1.7518 Tot= 13.5539
Mulliken charges:
1 N -0.823573
2 C -0.270550
3 C 0.755468
4 O -0.714810
5 C -0.577718
6 H 0.298340
7 H 0.195021
8 H 0.229822
9 H 0.305999
10 H 0.412472
11 H 0.440528
12 H 0.440480
13 O -0.691479
Chem


N 0.568 [N(1)]
C 0.071 [C(2)]
C 0.624 [C(3)]
O -0.664 [O(4)]
C -0.127 [C(5)]
H 0.046 [H(6)]
H 0.046 [H(7)]
H 0.045 [H(8)]
H 0.043 [H(9)]
H 0.113 [H(10)]
H 0.114 [H(11)]
H 0.115 [H(12)]
O -0.992 [O(13)]
V(min)= 136,77 V(max)=3835,94 cond(D)2.8989
We have established a relationship between the frequency of the vibrational spectrum of a molecule and its stability, as well as separately formulated a criterion for analyzing the conformational mobility of a polyatomic molecule in the IR region.
This video presents the Alanine molecule, its vibrational spectrum, minimum and maximum frequencies, the formula for determining the stability coefficient
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Direction of affinity change
A value lg(cond(W)) that shows the stability of a biological complex and shows the direction of change in the affinity of a dimer under various mutations.

Biochemical | biological software.

Software that allows you to get preliminary results before conducting a laboratory experiment!
Benefits of using our software for various biochemical studies:
Selection of amino acid residues in flexible chains to increase the antibody-antigen affinity
Determination of the direction of affinity change upon replacement of key amino acid residues
Determination of Suitable Small Molecules for Cancer Changes in Proteins
Selection of peptide sequences to increase the stability of amyloid complexes

Examples using small molecules are given below

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